Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.38□□□□□ -0.27
Cfap53Q9D439 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cfap53Q9D439 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm24830-201ENSMUST00000102024 166 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm27501-201ENSMUST00000183599 107 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm9368-201ENSMUST00000219348 831 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm26232-201ENSMUST00000083360 166 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cfap53Q9D439 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.36□□□□□ -0.27
Cfap53Q9D439 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.36□□□□□ -0.27
Cfap53Q9D439 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cfap53Q9D439 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm25214-201ENSMUST00000104573 129 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm23912-201ENSMUST00000104687 87 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm11222-201ENSMUST00000119005 738 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm14832-201ENSMUST00000121289 322 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms