Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.5□□□□□ -0.57
Upk1aQ9D132 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.5□□□□□ -0.57
Upk1aQ9D132 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1aQ9D132 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm26927-201ENSMUST00000182385 965 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm39404-201ENSMUST00000216350 313 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.49□□□□□ -0.57
Upk1aQ9D132 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk1aQ9D132 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1aQ9D132 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1aQ9D132 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms