Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx56Q9D0R4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm10312-201ENSMUST00000078515 489 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx56Q9D0R4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm23270-201ENSMUST00000104055 131 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Mir8109-201ENSMUST00000184375 117 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms