Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTRAFQ9CQE8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm15371-201ENSMUST00000117057 784 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm38294-201ENSMUST00000192831 381 ntBASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTRAFQ9CQE8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm22175-201ENSMUST00000175007 78 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm9522-201ENSMUST00000182394 926 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.86□□□□□ -0.83
RTRAFQ9CQE8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms