Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Gm27046-201ENSMUST00000182160 463 ntBASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rpa3Q9CQ71 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rpa3Q9CQ71 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm24255-201ENSMUST00000104481 128 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm14109-201ENSMUST00000118814 309 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm20482-202ENSMUST00000174729 825 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm18711-201ENSMUST00000199341 750 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm7783-201ENSMUST00000204795 781 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rpa3Q9CQ71 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms