Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdh23Q99PF4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Gm26957-201ENSMUST00000182645 977 ntBASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.02□□□□□ -0.48
Cdh23Q99PF4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm8152-201ENSMUST00000120842 637 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm9089-201ENSMUST00000122027 526 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm23769-201ENSMUST00000104441 121 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm15374-201ENSMUST00000119313 844 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm13624-201ENSMUST00000120263 462 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm25394-201ENSMUST00000157338 133 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdh23Q99PF4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm12470-201ENSMUST00000117239 1049 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm20493-201ENSMUST00000173706 213 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Gm10807-201ENSMUST00000177134 795 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdh23Q99PF4 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.01□□□□□ -0.49
Cdh23Q99PF4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms