Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Map1b-203ENSMUST00000223725 2669 ntBASIC11.87□□□□□ -0.51
Msh4Q99MT2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Msh4Q99MT2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm25043-201ENSMUST00000158604 212 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Msh4Q99MT2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.86□□□□□ -0.51
Msh4Q99MT2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Gm17376-201ENSMUST00000166016 84 ntBASIC11.85□□□□□ -0.51
Msh4Q99MT2 Gm27023-201ENSMUST00000182372 285 ntBASIC11.85□□□□□ -0.51
Msh4Q99MT2 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.85□□□□□ -0.51
Msh4Q99MT2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msh4Q99MT2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms