Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Snora73a-201ENSMUST00000082453 205 ntBASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cdk5rap3Q99LM2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Gm27023-201ENSMUST00000182372 285 ntBASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdk5rap3Q99LM2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Gm42937-201ENSMUST00000197360 752 ntBASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdk5rap3Q99LM2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms