Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vmp1Q99KU0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm13786-201ENSMUST00000122371 333 ntBASIC11.79□□□□□ -0.52
Vmp1Q99KU0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm38266-201ENSMUST00000194931 421 ntBASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vmp1Q99KU0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm12241-201ENSMUST00000118330 726 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm38158-201ENSMUST00000194617 339 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm10608-202ENSMUST00000213924 676 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vmp1Q99KU0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms