Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.1□□□□□ -0.63
Lims1Q99JW4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lims1Q99JW4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.09□□□□□ -0.63
Lims1Q99JW4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.09□□□□□ -0.63
Lims1Q99JW4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gm17420-201ENSMUST00000164753 153 ntBASIC11.09□□□□□ -0.63
Lims1Q99JW4 Gm42693-201ENSMUST00000196779 631 ntBASIC11.09□□□□□ -0.63
Lims1Q99JW4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.09□□□□□ -0.63
Lims1Q99JW4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lims1Q99JW4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lims1Q99JW4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.63
Lims1Q99JW4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lims1Q99JW4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.08□□□□□ -0.63
Lims1Q99JW4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Lims1Q99JW4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm13226-201ENSMUST00000117838 404 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm14999-201ENSMUST00000121039 624 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm13570-201ENSMUST00000140763 309 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm5706-201ENSMUST00000181525 993 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm18711-201ENSMUST00000199341 750 ntBASIC11.08□□□□□ -0.64
Lims1Q99JW4 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms