Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Thumpd1Q99J36 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Thumpd1Q99J36 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm24196-201ENSMUST00000179161 110 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm18018-201ENSMUST00000198273 408 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Thumpd1Q99J36 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm45925-201ENSMUST00000218882 744 ntBASIC10.82□□□□□ -0.68
Thumpd1Q99J36 Gm5781-201ENSMUST00000219792 443 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms