Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb6Q91XZ4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm14109-201ENSMUST00000118814 309 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm6963-201ENSMUST00000147879 379 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm5070-201ENSMUST00000177599 862 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm38266-201ENSMUST00000194931 421 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb6Q91XZ4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm7722-201ENSMUST00000120646 741 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb6Q91XZ4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.47□□□□□ -0.41
Pcdhb6Q91XZ4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms