Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm11956-201ENSMUST00000119525 512 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm13263-201ENSMUST00000121271 838 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm14460-201ENSMUST00000121511 639 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm4726-201ENSMUST00000135604 736 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm6019-201ENSMUST00000148369 736 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm5706-201ENSMUST00000181525 993 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.91□□□□□ -0.18
Trex1Q91XB0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trex1Q91XB0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm4310-201ENSMUST00000177847 889 ntBASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm17831-201ENSMUST00000205579 900 ntBASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm45398-201ENSMUST00000210561 165 ntBASIC13.9□□□□□ -0.18
Trex1Q91XB0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.9□□□□□ -0.18
Trex1Q91XB0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trex1Q91XB0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trex1Q91XB0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trex1Q91XB0 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.9□□□□□ -0.19
Trex1Q91XB0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trex1Q91XB0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm12579-201ENSMUST00000118040 783 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm7666-201ENSMUST00000146631 819 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trex1Q91XB0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm8815-201ENSMUST00000173809 620 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trex1Q91XB0 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.89□□□□□ -0.19
Trex1Q91XB0 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms