Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm13736-201ENSMUST00000119272 253 ntBASIC12.09□□□□□ -0.47
Usb1Q91W78 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Usb1Q91W78 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.09□□□□□ -0.47
Usb1Q91W78 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.09□□□□□ -0.47
Usb1Q91W78 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.09□□□□□ -0.47
Usb1Q91W78 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Usb1Q91W78 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Usb1Q91W78 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.47
Usb1Q91W78 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.47
Usb1Q91W78 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Usb1Q91W78 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usb1Q91W78 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.08□□□□□ -0.48
Usb1Q91W78 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm18304-201ENSMUST00000189162 546 ntBASIC12.08□□□□□ -0.48
Usb1Q91W78 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.08□□□□□ -0.48
Usb1Q91W78 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.08□□□□□ -0.48
Usb1Q91W78 Gm24136-201ENSMUST00000083374 165 ntBASIC12.08□□□□□ -0.48
Usb1Q91W78 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usb1Q91W78 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usb1Q91W78 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.08□□□□□ -0.48
Usb1Q91W78 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.07□□□□□ -0.48
Usb1Q91W78 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm23119-201ENSMUST00000158610 140 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm27390-201ENSMUST00000184516 176 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Gm5950-201ENSMUST00000213337 772 ntBASIC12.07□□□□□ -0.48
Usb1Q91W78 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Usb1Q91W78 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usb1Q91W78 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.06□□□□□ -0.48
Usb1Q91W78 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Usb1Q91W78 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms