Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tram1Q91V04 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Tram1Q91V04 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tram1Q91V04 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tram1Q91V04 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tram1Q91V04 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm12341-201ENSMUST00000119724 503 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm15487-201ENSMUST00000122373 465 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm2231-201ENSMUST00000125661 612 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.46□□□□□ -0.73
Tram1Q91V04 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Mir8102-201ENSMUST00000184148 139 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm27989-201ENSMUST00000184721 107 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.46□□□□□ -0.73
Tram1Q91V04 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.46□□□□□ -0.73
Tram1Q91V04 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Tram1Q91V04 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tram1Q91V04 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.46□□□□□ -0.74
Tram1Q91V04 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.46□□□□□ -0.74
Tram1Q91V04 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Tram1Q91V04 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Tram1Q91V04 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tram1Q91V04 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.45□□□□□ -0.74
Tram1Q91V04 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm27243-201ENSMUST00000183964 521 ntBASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm43514-201ENSMUST00000198852 424 ntBASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.45□□□□□ -0.74
Tram1Q91V04 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.45□□□□□ -0.74
Tram1Q91V04 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tram1Q91V04 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.45□□□□□ -0.74
Tram1Q91V04 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms