Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm7627-201ENSMUST00000183205 999 ntBASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm6644-201ENSMUST00000186507 951 ntBASIC14.09□□□□□ -0.15
StrcQ8VIM6 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm5308-201ENSMUST00000196752 1354 ntBASIC14.09□□□□□ -0.15
StrcQ8VIM6 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.09□□□□□ -0.15
StrcQ8VIM6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
StrcQ8VIM6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
StrcQ8VIM6 Gm14234-201ENSMUST00000119539 845 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Gm13981-201ENSMUST00000122360 447 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
StrcQ8VIM6 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.15
StrcQ8VIM6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Gm31274-201ENSMUST00000197356 229 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
StrcQ8VIM6 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
StrcQ8VIM6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
StrcQ8VIM6 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
StrcQ8VIM6 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.08□□□□□ -0.15
StrcQ8VIM6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm13171-201ENSMUST00000117233 391 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm13094-201ENSMUST00000117930 409 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm13422-201ENSMUST00000118834 504 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm17221-201ENSMUST00000163909 481 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm17073-201ENSMUST00000168069 556 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm18041-201ENSMUST00000218210 618 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm9791-201ENSMUST00000060997 447 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.08□□□□□ -0.16
StrcQ8VIM6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
StrcQ8VIM6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Gm24279-201ENSMUST00000104236 131 ntBASIC14.07□□□□□ -0.16
StrcQ8VIM6 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.07□□□□□ -0.16
StrcQ8VIM6 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.07□□□□□ -0.16
StrcQ8VIM6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
StrcQ8VIM6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms