Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm2546-201ENSMUST00000182630 991 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm43133-201ENSMUST00000197472 463 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm18062-201ENSMUST00000208020 547 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm18055-201ENSMUST00000208254 547 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm45880-201ENSMUST00000213041 853 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
H1fooQ8VIK3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm24830-201ENSMUST00000102024 166 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Gm26232-201ENSMUST00000083360 166 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H1fooQ8VIK3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms