Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm12859-201ENSMUST00000117834 427 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm17208-201ENSMUST00000168388 535 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Mir7654-201ENSMUST00000185082 70 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.32□□□□□ -0.44
Rpa1Q8VEE4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm44863-201ENSMUST00000207613 1422 ntBASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm14539-201ENSMUST00000117527 174 ntBASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm13123-201ENSMUST00000122173 492 ntBASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm25025-201ENSMUST00000175018 111 ntBASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpa1Q8VEE4 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm14363-201ENSMUST00000122304 409 ntBASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm37917-201ENSMUST00000194711 392 ntBASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpa1Q8VEE4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms