Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm13296-201ENSMUST00000117854 997 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm14130-201ENSMUST00000118417 987 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm18056-201ENSMUST00000207670 568 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm18061-201ENSMUST00000208350 562 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm18063-201ENSMUST00000208529 568 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm18052-201ENSMUST00000208750 559 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm19994-201ENSMUST00000217086 586 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rprd1aQ8VDS4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rprd1aQ8VDS4 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rprd1aQ8VDS4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms