Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm25668-201ENSMUST00000157700 129 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm44651-201ENSMUST00000207343 372 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rpap2Q8VC34 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rpap2Q8VC34 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rpap2Q8VC34 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Gm15610-201ENSMUST00000120584 195 ntBASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.33□□□□□ -0.28
Rpap2Q8VC34 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpap2Q8VC34 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm44967-201ENSMUST00000207047 631 ntBASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpap2Q8VC34 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.32□□□□□ -0.28
Rpap2Q8VC34 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms