Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.29□□□□□ -0.44
Slf1Q8R3P9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.28□□□□□ -0.44
Slf1Q8R3P9 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.28□□□□□ -0.44
Slf1Q8R3P9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.28□□□□□ -0.44
Slf1Q8R3P9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.28□□□□□ -0.44
Slf1Q8R3P9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Slf1Q8R3P9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Slf1Q8R3P9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Slf1Q8R3P9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms