Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm27501-201ENSMUST00000183599 107 ntBASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm9996-201ENSMUST00000070359 913 ntBASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim29Q8R2Q0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim29Q8R2Q0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm25214-201ENSMUST00000104573 129 ntBASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm24845-201ENSMUST00000158034 109 ntBASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm30285-201ENSMUST00000214614 422 ntBASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim29Q8R2Q0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm18711-201ENSMUST00000199341 750 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim29Q8R2Q0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms