Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nudcd3Q8R1N4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nudcd3Q8R1N4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nudcd3Q8R1N4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gm10012-201ENSMUST00000078252 192 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nudcd3Q8R1N4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm23119-201ENSMUST00000158610 140 ntBASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Mir6977-201ENSMUST00000184960 64 ntBASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nudcd3Q8R1N4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms