Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm6963-201ENSMUST00000147879 379 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Prpf39Q8K2Z2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm11989-201ENSMUST00000117240 672 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm11362-201ENSMUST00000118838 850 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm37259-201ENSMUST00000193903 849 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.62□□□□□ -0.39
Prpf39Q8K2Z2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Prpf39Q8K2Z2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms