Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rfwd3Q8CIK8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Cog3-203ENSMUST00000227473 4197 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm23270-201ENSMUST00000104055 131 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm11930-201ENSMUST00000117788 190 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm14381-201ENSMUST00000122105 414 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm37259-201ENSMUST00000193903 849 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rfwd3Q8CIK8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Gm8712-201ENSMUST00000221090 701 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.46□□□□□ -0.57
Rfwd3Q8CIK8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms