Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.29□□□□□ -0.44
Clip4Q8CI96 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clip4Q8CI96 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm26035-201ENSMUST00000083065 308 ntBASIC12.28□□□□□ -0.44
Clip4Q8CI96 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clip4Q8CI96 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clip4Q8CI96 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm13350-201ENSMUST00000120519 479 ntBASIC12.27□□□□□ -0.45
Clip4Q8CI96 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.27□□□□□ -0.45
Clip4Q8CI96 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.27□□□□□ -0.45
Clip4Q8CI96 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Clip4Q8CI96 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Gm11222-201ENSMUST00000119005 738 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 Gm11964-201ENSMUST00000120982 444 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 Gm7584-201ENSMUST00000175829 940 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Gm21769-201ENSMUST00000211922 111 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.26□□□□□ -0.45
Clip4Q8CI96 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clip4Q8CI96 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms