Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lrif1Q8CDD9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lrif1Q8CDD9 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lrif1Q8CDD9 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.02□□□□□ -0.49
Lrif1Q8CDD9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms