Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.27
Prpf31Q8CCF0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf31Q8CCF0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm25732-201ENSMUST00000175168 60 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm18730-201ENSMUST00000218038 343 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prpf31Q8CCF0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Gm22133-201ENSMUST00000102082 109 ntBASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf31Q8CCF0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Gm12266-201ENSMUST00000120311 962 ntBASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Gm17040-202ENSMUST00000170597 889 ntBASIC13.31□□□□□ -0.28
Prpf31Q8CCF0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms