Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc60Q8C4J0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Mir877-201ENSMUST00000104738 85 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm26361-201ENSMUST00000158868 186 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm4857-201ENSMUST00000192718 785 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm44262-201ENSMUST00000204969 372 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm9257-201ENSMUST00000221254 232 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ccdc60Q8C4J0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm2238-201ENSMUST00000192074 3669 ntBASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm15808-201ENSMUST00000119046 604 ntBASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ccdc60Q8C4J0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc60Q8C4J0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms