Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp44Q8C2S0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usp44Q8C2S0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp44Q8C2S0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp44Q8C2S0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gm14441-201ENSMUST00000121960 540 ntBASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gm4857-201ENSMUST00000192718 785 ntBASIC14.19□□□□□ -0.14
Usp44Q8C2S0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Usp44Q8C2S0 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.18□□□□□ -0.14
Usp44Q8C2S0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms