Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim47Q8C0E3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim47Q8C0E3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim47Q8C0E3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm23949-201ENSMUST00000104027 127 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm12439-201ENSMUST00000117162 365 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm12217-201ENSMUST00000118858 696 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm15711-201ENSMUST00000118889 535 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm12380-201ENSMUST00000119012 544 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm14247-201ENSMUST00000120950 237 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Mir7070-201ENSMUST00000183657 86 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm36991-201ENSMUST00000191800 648 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 AY036118-201ENSMUST00000200021 923 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm3786-201ENSMUST00000202659 378 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm4607-201ENSMUST00000206649 577 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trim47Q8C0E3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm23200-201ENSMUST00000104379 132 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm27552-201ENSMUST00000183351 62 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm27844-201ENSMUST00000183613 62 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm27627-201ENSMUST00000183644 150 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Gm28450-201ENSMUST00000187349 638 ntBASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim47Q8C0E3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Mir5132-201ENSMUST00000175166 71 ntBASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm43962-201ENSMUST00000203898 190 ntBASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim47Q8C0E3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms