Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.55□□□□□ -0.4
Trub1Q8C0D0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gm3096-201ENSMUST00000185770 364 ntBASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trub1Q8C0D0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm12015-201ENSMUST00000117065 843 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm11930-201ENSMUST00000117788 190 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm5706-201ENSMUST00000181525 993 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trub1Q8C0D0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trub1Q8C0D0 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Gm7722-201ENSMUST00000120646 741 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Gm12164-201ENSMUST00000121695 551 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.52□□□□□ -0.41
Trub1Q8C0D0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.52□□□□□ -0.41
Trub1Q8C0D0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms