Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm9630-201ENSMUST00000178304 885 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm43371-201ENSMUST00000202838 1031 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.87□□□□□ -0.67
Ube3dQ8BX13 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ube3dQ8BX13 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Mir877-201ENSMUST00000104738 85 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm25668-201ENSMUST00000157700 129 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm17376-201ENSMUST00000166016 84 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm2546-201ENSMUST00000182630 991 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm6082-201ENSMUST00000215204 454 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ube3dQ8BX13 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.85□□□□□ -0.67
Ube3dQ8BX13 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube3dQ8BX13 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.85□□□□□ -0.67
Ube3dQ8BX13 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube3dQ8BX13 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ube3dQ8BX13 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms