Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Aph1aQ8BVF7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Aph1aQ8BVF7 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Aph1aQ8BVF7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Aph1aQ8BVF7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.77□□□□□ -0.68
Aph1aQ8BVF7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Aph1aQ8BVF7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm25700-201ENSMUST00000177693 110 ntBASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm38241-201ENSMUST00000192641 898 ntBASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Aph1aQ8BVF7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm11989-201ENSMUST00000117240 672 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm11362-201ENSMUST00000118838 850 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm44124-201ENSMUST00000204159 472 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm19994-201ENSMUST00000217086 586 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Aph1aQ8BVF7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms