Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.47□□□□□ -0.41
Sfr1Q8BP27 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sfr1Q8BP27 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm24845-201ENSMUST00000158034 109 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm37259-201ENSMUST00000193903 849 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm42937-201ENSMUST00000197360 752 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm10312-201ENSMUST00000078515 489 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.46□□□□□ -0.41
Sfr1Q8BP27 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sfr1Q8BP27 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.46□□□□□ -0.42
Sfr1Q8BP27 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm25668-201ENSMUST00000157700 129 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Gm8712-201ENSMUST00000221090 701 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sfr1Q8BP27 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms