Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cdhr3Q8BL00 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gm29127-201ENSMUST00000188304 517 ntBASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cdhr3Q8BL00 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm6222-202ENSMUST00000182143 629 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm5781-201ENSMUST00000219792 443 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cdhr3Q8BL00 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms