Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcal1Q8BJL0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcal1Q8BJL0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm12164-201ENSMUST00000121695 551 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm7666-201ENSMUST00000146631 819 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm9797-202ENSMUST00000218003 294 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcal1Q8BJL0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms