Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SynbQ8BI41 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SynbQ8BI41 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.69□□□□□ -0.54
SynbQ8BI41 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
SynbQ8BI41 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SynbQ8BI41 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.69□□□□□ -0.54
SynbQ8BI41 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm23200-201ENSMUST00000104379 132 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm8913-201ENSMUST00000209491 641 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SynbQ8BI41 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SynbQ8BI41 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.68□□□□□ -0.54
SynbQ8BI41 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
SynbQ8BI41 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.67□□□□□ -0.54
SynbQ8BI41 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.67□□□□□ -0.54
SynbQ8BI41 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.67□□□□□ -0.54
SynbQ8BI41 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.67□□□□□ -0.54
SynbQ8BI41 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SynbQ8BI41 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SynbQ8BI41 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms