Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn3Q8BHH8 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm13786-201ENSMUST00000122371 333 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm37201-201ENSMUST00000191845 523 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm43118-201ENSMUST00000199149 775 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm18054-201ENSMUST00000207539 555 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm10076-201ENSMUST00000073238 384 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.49□□□□□ -0.57
Clrn3Q8BHH8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm11597-201ENSMUST00000121423 964 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm27572-201ENSMUST00000183702 255 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm27243-201ENSMUST00000183964 521 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm44124-201ENSMUST00000204159 472 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm7046-201ENSMUST00000221351 977 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Clrn3Q8BHH8 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms