Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.33□□□□□ -0.6
Atg4dQ8BGV9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm24749-201ENSMUST00000157838 343 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm7003-201ENSMUST00000195089 312 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Atg4dQ8BGV9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atg4dQ8BGV9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atg4dQ8BGV9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms