Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Avl9Q80U56 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.82□□□□□ -0.52
Avl9Q80U56 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Avl9Q80U56 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.82□□□□□ -0.52
Avl9Q80U56 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.82□□□□□ -0.52
Avl9Q80U56 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Avl9Q80U56 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm23200-201ENSMUST00000104379 132 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.81□□□□□ -0.52
Avl9Q80U56 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm17040-202ENSMUST00000170597 889 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 Mir3102-201ENSMUST00000175555 104 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm18038-201ENSMUST00000197900 485 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.81□□□□□ -0.52
Avl9Q80U56 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.81□□□□□ -0.52
Avl9Q80U56 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Avl9Q80U56 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gm18753-201ENSMUST00000201000 566 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.8□□□□□ -0.52
Avl9Q80U56 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.8□□□□□ -0.52
Avl9Q80U56 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 BC043934-202ENSMUST00000185694 2356 ntBASIC11.8□□□□□ -0.52
Avl9Q80U56 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Avl9Q80U56 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms