Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.35□□□□□ -0.59
Pif1Q80SX8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pif1Q80SX8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm9996-201ENSMUST00000070359 913 ntBASIC11.34□□□□□ -0.59
Pif1Q80SX8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pif1Q80SX8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pif1Q80SX8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pif1Q80SX8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Gm11450-201ENSMUST00000121144 333 ntBASIC11.33□□□□□ -0.6
Pif1Q80SX8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.33□□□□□ -0.6
Pif1Q80SX8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms