Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rif1Q6PR54 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm13981-201ENSMUST00000122360 447 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm18776-201ENSMUST00000188833 654 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm13117-201ENSMUST00000120894 691 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm16210-201ENSMUST00000122161 610 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm17192-201ENSMUST00000169031 511 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm24809-201ENSMUST00000175318 271 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Gm6423-201ENSMUST00000204315 934 ntBASIC10.31□□□□□ -0.76
Rif1Q6PR54 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rif1Q6PR54 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rif1Q6PR54 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.3□□□□□ -0.76
Rif1Q6PR54 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm12623-201ENSMUST00000119849 1983 ntBASIC10.3□□□□□ -0.76
Rif1Q6PR54 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.3□□□□□ -0.76
Rif1Q6PR54 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm7815-201ENSMUST00000196104 832 ntBASIC10.3□□□□□ -0.76
Rif1Q6PR54 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rif1Q6PR54 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms