Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Smarcd3Q6P9Z1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm23119-201ENSMUST00000158610 140 ntBASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm18584-201ENSMUST00000203098 964 ntBASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Smarcd3Q6P9Z1 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm9083-201ENSMUST00000120423 819 ntBASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm43433-201ENSMUST00000196573 481 ntBASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm43818-201ENSMUST00000200605 466 ntBASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Smarcd3Q6P9Z1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.15□□□□□ -0.63
Smarcd3Q6P9Z1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.14□□□□□ -0.63
Smarcd3Q6P9Z1 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms