Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Casc4Q6P2L7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm23119-201ENSMUST00000158610 140 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm17376-201ENSMUST00000166016 84 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm3096-201ENSMUST00000185770 364 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.34□□□□□ -0.43
Casc4Q6P2L7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Casc4Q6P2L7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Casc4Q6P2L7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Casc4Q6P2L7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Casc4Q6P2L7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Casc4Q6P2L7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm25668-201ENSMUST00000157700 129 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm27046-201ENSMUST00000182160 463 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.33□□□□□ -0.44
Casc4Q6P2L7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms