Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ParpbpQ6IRT3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm11531-201ENSMUST00000117614 555 ntBASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm13297-201ENSMUST00000120205 934 ntBASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Gm8227-201ENSMUST00000223306 571 ntBASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ParpbpQ6IRT3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
ParpbpQ6IRT3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm13570-201ENSMUST00000140763 309 ntBASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm26956-201ENSMUST00000182176 986 ntBASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm18304-201ENSMUST00000189162 546 ntBASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ParpbpQ6IRT3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.44□□□□□ -0.58
ParpbpQ6IRT3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms