Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.1□□□□□ -0.63
VcanQ62059 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
VcanQ62059 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
VcanQ62059 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Gm16210-201ENSMUST00000122161 610 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.1□□□□□ -0.63
VcanQ62059 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.1□□□□□ -0.63
VcanQ62059 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Gm25569-201ENSMUST00000157175 131 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Gm37826-201ENSMUST00000195329 322 ntBASIC11.1□□□□□ -0.63
VcanQ62059 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
VcanQ62059 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
VcanQ62059 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.1□□□□□ -0.63
VcanQ62059 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
VcanQ62059 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Gm23132-201ENSMUST00000104254 132 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Gm15815-201ENSMUST00000120569 255 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.09□□□□□ -0.63
VcanQ62059 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VcanQ62059 Gm18010-201ENSMUST00000203553 202 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.09□□□□□ -0.63
VcanQ62059 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Paupar-201ENSMUST00000194826 3482 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.09□□□□□ -0.63
VcanQ62059 Gm43966-201ENSMUST00000203301 612 ntBASIC11.09□□□□□ -0.63
VcanQ62059 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
VcanQ62059 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
VcanQ62059 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.09□□□□□ -0.63
VcanQ62059 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
VcanQ62059 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VcanQ62059 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VcanQ62059 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
VcanQ62059 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
VcanQ62059 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
VcanQ62059 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
VcanQ62059 Gm11544-201ENSMUST00000120215 382 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Gm22344-201ENSMUST00000122642 278 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
VcanQ62059 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Gm38151-201ENSMUST00000195085 289 ntBASIC11.08□□□□□ -0.64
VcanQ62059 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VcanQ62059 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VcanQ62059 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms