Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rai1Q61818 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rai1Q61818 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.61□□□□□ -0.55
Rai1Q61818 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.61□□□□□ -0.55
Rai1Q61818 Gm26013-201ENSMUST00000104404 119 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.61□□□□□ -0.55
Rai1Q61818 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Gm8342-201ENSMUST00000209839 757 ntBASIC11.61□□□□□ -0.55
Rai1Q61818 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rai1Q61818 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.6□□□□□ -0.55
Rai1Q61818 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rai1Q61818 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.6□□□□□ -0.55
Rai1Q61818 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rai1Q61818 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Gm6450-201ENSMUST00000200896 574 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Gm6108-201ENSMUST00000208365 367 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rai1Q61818 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rai1Q61818 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rai1Q61818 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rai1Q61818 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.6□□□□□ -0.55
Rai1Q61818 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rai1Q61818 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Rai1Q61818 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.59□□□□□ -0.55
Rai1Q61818 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm44315-201ENSMUST00000203041 219 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Gm4978-201ENSMUST00000071565 801 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rai1Q61818 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm11783-201ENSMUST00000119549 885 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Gm14219-201ENSMUST00000120414 288 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Gm7150-201ENSMUST00000122032 981 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.59□□□□□ -0.55
Rai1Q61818 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Rai1Q61818 Gm20392-201ENSMUST00000173047 701 ntBASIC11.59□□□□□ -0.55
Rai1Q61818 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.59□□□□□ -0.55
Rai1Q61818 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms