Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Vmn1r223Q5SSA0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm12957-201ENSMUST00000117835 377 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm12363-201ENSMUST00000122250 668 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm5370-201ENSMUST00000187187 574 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm32025-201ENSMUST00000217960 307 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm8227-201ENSMUST00000223306 571 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gm10268-201ENSMUST00000085340 555 ntBASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Vmn1r223Q5SSA0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm27682-201ENSMUST00000183930 110 ntBASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm37424-201ENSMUST00000191727 561 ntBASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm9899-201ENSMUST00000065519 555 ntBASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vmn1r223Q5SSA0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Vmn1r223Q5SSA0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms