Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trpm3Q5F4S9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm37981-201ENSMUST00000194280 535 ntBASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trpm3Q5F4S9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm8574-201ENSMUST00000203207 924 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm21778-201ENSMUST00000178779 471 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gm19009-201ENSMUST00000223072 823 ntBASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trpm3Q5F4S9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trpm3Q5F4S9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms